Integrating host gene expression and the microbiome to explore disease pathogenesis

Por Byrd, Allyson L, Segre, Julia A
Publicado no Genome Biol (2015)

Elucidating microbial codes to distinguish individuals

Por Byrd, Allyson L., Segre, Julia A.
Publicado no Proc Natl Acad Sci U S A (2015)

Temporal Stability of the Human Skin Microbiome

Por Oh, Julia, Byrd, Allyson L., Park, Morgan, Kong, Heidi H., Segre, Julia A.
Publicado no Cell (2016)

Biogeography and individuality shape function in the human skin metagenome

Por Oh, Julia, Byrd, Allyson L., Deming, Clay, Conlan, Sean, Kong, Heidi H., Segre, Julia A.
Publicado em 2014

PathoScope 2.0: a complete computational framework for strain identification in environmental or clinical sequencing samples

Por Hong, Changjin, Manimaran, Solaiappan, Shen, Ying, Perez-Rogers, Joseph F, Byrd, Allyson L, Castro-Nallar, Eduardo, Crandall, Keith A, Johnson, William Evan
Publicado em 2014

Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian

Por Stefanik, Derek J, Lubinski, Tristan J, Granger, Brian R, Byrd, Allyson L, Reitzel, Adam M, DeFilippo, Lukas, Lorenc, Allison, Finnerty, John R
Publicado em 2014

Staphylococcus aureus and S. epidermidis strain diversity underlying human atopic dermatitis

Por Byrd, Allyson L., Deming, Clay, Cassidy, Sara K.B., Harrison, Oliver J., Ng, Weng-Ian, Conlan, Sean, Belkaid, Yasmine, Segre, Julia A., Kong, Heidi H.
Publicado no Sci Transl Med (2017)

Contextual control of skin immunity and inflammation by Corynebacterium

Por Ridaura, Vanessa K., Bouladoux, Nicolas, Claesen, Jan, Chen, Y. Erin, Byrd, Allyson L., Constantinides, Michael G., Merrill, Eric D., Tamoutounour, Samira, Fischbach, Michael A., Belkaid, Yasmine
Publicado no J Exp Med (2018)

Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data

Por Byrd, Allyson L, Perez-Rogers, Joseph F, Manimaran, Solaiappan, Castro-Nallar, Eduardo, Toma, Ian, McCaffrey, Tim, Siegel, Marc, Benson, Gary, Crandall, Keith A, Johnson, William Evan
Publicado em 2014

Bone marrow-resident NK cells prime monocytes for regulatory function during infection

Por Askenase, Michael H., Han, Seong-Ji, Byrd, Allyson L., da Fonseca, Denise Morais, Bouladoux, Nicolas, Wilhelm, Christoph, Konkel, Joanne E., Hand, Timothy W., Lacerda-Queiroz, Norinne, Su, Xin-Zhuan, Trinchieri, Giorgio, Grainger, John R., Belkaid, Yasmine
Publicado no Immunity (2015)

Microbiota-dependent sequelae of acute infection compromise tissue-specific immunity

Por da Fonseca, Denise Morais, Hand, Timothy W., Han, Seong-Ji, Gerner, Michael Y., Zaretsky, Arielle Glatman, Byrd, Allyson L., Harrison, Oliver J., Ortiz, Alexandra M., Quinones, Mariam, Trinchieri, Giorgio, Brenchley, Jason M., Brodsky, Igor E., Germain, Ronald N., Randolph, Gwendalyn J., Belkaid, Yasmine
Publicado no Cell (2015)

The white adipose tissue is a reservoir for memory T cells that promotes protective memory responses to infection

Por Han, Seong-Ji, Zaretsky, Arielle Glatman, Andrade-Oliveira, Vinicius, Collins, Nicholas, Dzutsev, Amiran, Shaik, Jahangheer, da Fonseca, Denise Morais, Harrison, Oliver J., Tamoutounour, Samira, Byrd, Allyson L., Smelkinson, Margery, Bouladoux, Nicolas, Bliska, James B., Brenchley, Jason M., Brodsky, Igor E., Belkaid, Yasmine
Publicado no Immunity (2017)

Commensal–dendritic-cell interaction specifies a unique protective skin immune signature

Por Naik, Shruti, Bouladoux, Nicolas, Linehan, Jonathan L., Han, Seong-Ji, Harrison, Oliver J., Wilhelm, Christoph, Conlan, Sean, Himmelfarb, Sarah, Byrd, Allyson L., Deming, Clayton, Quinones, Mariam, Brenchley, Jason M., Kong, Heidi H., Tussiwand, Roxanne, Murphy, Kenneth M., Merad, Miriam, Segre, Julia A, Belkaid, Yasmine
Publicado no Nature (2015)

Non-classical immunity controls microbiota impact on skin immunity and tissue repair

Por Linehan, Jonathan L., Harrison, Oliver J., Han, Seong-Ji, Byrd, Allyson L., Vujkovic-Cvijin, Ivan, Villarino, Alejandro V., Sen, Shurjo K., Shaik, Jahangheer, Smelkinson, Margery, Tamoutounour, Samira, Collins, Nicholas, Bouladoux, Nicolas, Dzutsev, Amiran, Rosshart, Stephan P., Arbuckle, Jesse H., Wang, Chyung-Ru, Kristie, Thomas M., Rehermann, Barbara, Trinchieri, Giorgio, Brenchley, Jason M., O’Shea, John J., Belkaid, Yasmine
Publicado no Cell (2018)