CleanEx: new data extraction and merging tools based on MeSH term annotation

著者: Praz, Viviane, Bucher, Philipp
出版事項 2009

Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements

著者: Dimitrieva, Slavica, Bucher, Philipp
出版事項 2012

UCNEbase—a database of ultraconserved non-coding elements and genomic regulatory blocks

著者: Dimitrieva, Slavica, Bucher, Philipp
出版事項 2013

Predicting transcription factor site occupancy using DNA sequence intrinsic and cell-type specific chromatin features

著者: Kumar, Sunil, Bucher, Philipp
出版年 BMC Bioinformatics (2016)

MER41 Repeat Sequences Contain Inducible STAT1 Binding Sites

著者: Schmid, Christoph D., Bucher, Philipp
出版事項 2010

CleanEx: a database of heterogeneous gene expression data based on a consistent gene nomenclature

著者: Praz, Viviane, Jagannathan, Vidhya, Bucher, Philipp
出版事項 2004

Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal Promoters

著者: Dreos, René, Ambrosini, Giovanna, Bucher, Philipp
出版年 PLoS Comput Biol (2016)

SNP2TFBS – a database of regulatory SNPs affecting predicted transcription factor binding site affinity

著者: Kumar, Sunil, Ambrosini, Giovanna, Bucher, Philipp
出版年 Nucleic Acids Res (2017)

PWMScan: a fast tool for scanning entire genomes with a position-specific weight matrix

著者: Ambrosini, Giovanna, Groux, Romain, Bucher, Philipp
出版年 Bioinformatics (2018)

The Eukaryotic Promoter Database, EPD: new entry types and links to gene expression data

著者: Praz, Viviane, Périer, Rouaïda, Bonnard, Claude, Bucher, Philipp
出版事項 2002

Signal search analysis server

著者: Ambrosini, Giovanna, Praz, Viviane, Jagannathan, Vidhya, Bucher, Philipp
出版事項 2003

HTPSELEX—a database of high-throughput SELEX libraries for transcription factor binding sites

著者: Jagannathan, Vidhya, Roulet, Emmanuelle, Delorenzi, Mauro, Bucher, Philipp
出版事項 2006

Can Survival Prediction Be Improved By Merging Gene Expression Data Sets?

著者: Yasrebi, Haleh, Sperisen, Peter, Praz, Viviane, Bucher, Philipp
出版事項 2009

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

著者: Ambrosini, Giovanna, Dreos, René, Kumar, Sunil, Bucher, Philipp
出版年 BMC Genomics (2016)

Algorithms in bioinformatics 6th international workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006: proceedings /

著者: WABI (Workshop), Bücher, Philipp., Moret, Bernard M.E.
出版事項 2006.

Stealth Proteins: In Silico Identification of a Novel Protein Family Rendering Bacterial Pathogens Invisible to Host Immune Defense

著者: Sperisen, Peter, Schmid, Christoph D, Bucher, Philipp, Zilian, Olav
出版事項 2005

EPD in its twentieth year: towards complete promoter coverage of selected model organisms

著者: Schmid, Christoph D., Perier, Rouaïda, Praz, Viviane, Bucher, Philipp
出版事項 2006

Indexing Strategies for Rapid Searches of Short Words in Genome Sequences

著者: Iseli, Christian, Ambrosini, Giovanna, Bucher, Philipp, Jongeneel, C. Victor
出版事項 2007

MADAP, a flexible clustering tool for the interpretation of one-dimensional genome annotation data

著者: Schmid, Christoph D., Sengstag, Thierry, Bucher, Philipp, Delorenzi, Mauro
出版事項 2007

EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era

著者: Dreos, René, Ambrosini, Giovanna, Cavin Périer, Rouayda, Bucher, Philipp
出版事項 2013