Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo

by Atallah, Joel, Lott, Susan E.
Published in PLoS Genet (2018)

The importance of tissue specificity for RNA-seq: highlighting the errors of composite structure extractions

by Johnson, Brian R, Atallah, Joel, Plachetzki, David C
Published 2013

The making of a pest: the evolution of a fruit-penetrating ovipositor in Drosophila suzukii and related species

by Atallah, Joel, Teixeira, Lisa, Salazar, Raul, Zaragoza, George, Kopp, Artyom
Published 2014

The Utility of Shallow RNA-Seq for Documenting Differential Gene Expression in Genes with High and Low Levels of Expression

by Atallah, Joel, Plachetzki, David C., Jasper, W. Cameron, Johnson, Brian R.
Published 2013

Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut

by Shelomi, Matan, Jasper, W Cameron, Atallah, Joel, Kimsey, Lynn S, Johnson, Brian R
Published in BMC Genomics (2014)

Evolution of Drosophila sex comb length illustrates the inextricable interplay between selection and variation

by Malagón, Juan N., Ahuja, Abha, Sivapatham, Gabilan, Hung, Julian, Lee, Jiwon, Muñoz-Gómez, Sergio A., Atallah, Joel, Singh, Rama S., Larsen, Ellen
Published 2014

Evolution of larval segment position across 12 Drosophila species

by Kalay, Gizem, Atallah, Joel, Sierra, Noemie C., Tang, Austin M., Crofton, Amanda E., Murugesan, Mohan K., Wykoff‐Clary, Sherri, Lott, Susan E.
Published in Evolution (2020)

Comparative validation of the D. melanogaster modENCODE transcriptome annotation

by Chen, Zhen-Xia, Sturgill, David, Qu, Jiaxin, Jiang, Huaiyang, Park, Soo, Boley, Nathan, Suzuki, Ana Maria, Fletcher, Anthony R., Plachetzki, David C., FitzGerald, Peter C., Artieri, Carlo G., Atallah, Joel, Barmina, Olga, Brown, James B., Blankenburg, Kerstin P., Clough, Emily, Dasgupta, Abhijit, Gubbala, Sai, Han, Yi, Jayaseelan, Joy C., Kalra, Divya, Kim, Yoo-Ah, Kovar, Christie L., Lee, Sandra L., Li, Mingmei, Malley, James D., Malone, John H., Mathew, Tittu, Mattiuzzo, Nicolas R., Munidasa, Mala, Muzny, Donna M., Ongeri, Fiona, Perales, Lora, Przytycka, Teresa M., Pu, Ling-Ling, Robinson, Garrett, Thornton, Rebecca L., Saada, Nehad, Scherer, Steven E., Smith, Harold E., Vinson, Charles, Warner, Crystal B., Worley, Kim C., Wu, Yuan-Qing, Zou, Xiaoyan, Cherbas, Peter, Kellis, Manolis, Eisen, Michael B., Piano, Fabio, Kionte, Karin, Fitch, David H., Sternberg, Paul W., Cutter, Asher D., Duff, Michael O., Hoskins, Roger A., Graveley, Brenton R., Gibbs, Richard A., Bickel, Peter J., Kopp, Artyom, Carninci, Piero, Celniker, Susan E., Oliver, Brian, Richards, Stephen
Published 2014