Direct Interactions with Nascent Transcripts Is Potentially a Common Targeting Mechanism of Long Non-Coding RNAs

Tekijä Antonov, Ivan, Medvedeva, Yulia
Julkaisussa Genes (Basel) (2020)

Purine-rich low complexity regions are potential RNA binding hubs in the human genome

Tekijä Antonov, Ivan, Medvedeva, Yulia A.
Julkaisussa F1000Res (2019)

GeneTack database: genes with frameshifts in prokaryotic genomes and eukaryotic mRNA sequences

Tekijä Antonov, Ivan, Baranov, Pavel, Borodovsky, Mark
Julkaistu 2013

MetaGeneTack: ab initio detection of frameshifts in metagenomic sequences

Tekijä Tang, Shiyuyun, Antonov, Ivan, Borodovsky, Mark
Julkaistu 2013

Practical Guidance in Genome-Wide RNA:DNA Triple Helix Prediction

Tekijä Matveishina, Elena, Antonov, Ivan, Medvedeva, Yulia A.
Julkaisussa Int J Mol Sci (2020)

Analysis of discordant Affymetrix probesets casts serious doubt on idea of microarray data reutilization

Tekijä Marakhonov, Andrey, Sadovskaya, Nataliya, Antonov, Ivan, Baranova, Ancha, Skoblov, Mikhail
Julkaisussa BMC Genomics (2014)

Identification of the nature of reading frame transitions observed in prokaryotic genomes

Tekijä Antonov, Ivan, Coakley, Arthur, Atkins, John F., Baranov, Pavel V., Borodovsky, Mark
Julkaistu 2013

Conductive Atomic Force Microscopy Study of the Resistive Switching in Yttria-Stabilized Zirconia Films with Au Nanoparticles

Tekijä Filatov, Dmitry, Kazantseva, Inga, Antonov, Dmitry, Antonov, Ivan, Shenina, Maria, Pavlov, Dmitry, Gorshkov, Oleg
Julkaisussa Scanning (2018)

A Pilot Study of Bacterial Genes with Disrupted ORFs Reveals a Surprising Profusion of Protein Sequence Recoding Mediated by Ribosomal Frameshifting and Transcriptional Realignment

Tekijä Sharma, Virag, Firth, Andrew E., Antonov, Ivan, Fayet, Olivier, Atkins, John F., Borodovsky, Mark, Baranov, Pavel V.
Julkaistu 2011

Precisely spun super rotors

Tekijä Antonov, Ivan O., Stollenwerk, Patrick R., Venkataramanababu, Sruthi, de Lima Batista, Ana P., de Oliveira-Filho, Antonio G. S., Odom, Brian C.
Julkaisussa Nat Commun (2021)

Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi

Tekijä Xu, Junhuan, Linning, Rob, Fellers, John, Dickinson, Matthew, Zhu, Wenhan, Antonov, Ivan, Joly, David L, Donaldson, Michael E, Eilam, Tamar, Anikster, Yehoshua, Banks, Travis, Munro, Sarah, Mayo, Michael, Wynhoven, Brian, Ali, Johar, Moore, Richard, McCallum, Brent, Borodovsky, Mark, Saville, Barry, Bakkeren, Guus
Julkaistu 2011

The reaction of hydroxyl and methylperoxy radicals is not a major source of atmospheric methanol

Tekijä Caravan, Rebecca L., Khan, M. Anwar H., Zádor, Judit, Sheps, Leonid, Antonov, Ivan O., Rotavera, Brandon, Ramasesha, Krupa, Au, Kendrew, Chen, Ming-Wei, Rösch, Daniel, Osborn, David L., Fittschen, Christa, Schoemaecker, Coralie, Duncianu, Marius, Grira, Asma, Dusanter, Sebastien, Tomas, Alexandre, Percival, Carl J., Shallcross, Dudley E., Taatjes, Craig A.
Julkaisussa Nat Commun (2018)

Genome Sequences for Five Strains of the Emerging Pathogen Haemophilus haemolyticus

Tekijä Jordan, I. King, Conley, Andrew B., Antonov, Ivan V., Arthur, Robert A., Cook, Erin D., Cooper, Guy P., Jones, Bernard L., Knipe, Kristen M., Lee, Kevin J., Liu, Xing, Mitchell, Gabriel J., Pande, Pushkar R., Petit, Robert A., Qin, Shaopu, Rajan, Vani N., Sarda, Shruti, Sebastian, Aswathy, Tang, Shiyuyun, Thapliyal, Racchit, Varghese, Neha J., Ye, Tianjun, Katz, Lee S., Wang, Xin, Rowe, Lori, Frace, Michael, Mayer, Leonard W.
Julkaistu 2011

Functional annotation of human long noncoding RNAs via molecular phenotyping

Tekijä Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Sánchez Martinez, Diego Fernando, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
Julkaisussa Genome Res (2020)

Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping

Tekijä Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Martinez, Diego Fernando Sánchez, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
Julkaisussa Genome Res (2020)