Direct Interactions with Nascent Transcripts Is Potentially a Common Targeting Mechanism of Long Non-Coding RNAs

द्वारा Antonov, Ivan, Medvedeva, Yulia
में प्रकाशित Genes (Basel) (2020)

Purine-rich low complexity regions are potential RNA binding hubs in the human genome

द्वारा Antonov, Ivan, Medvedeva, Yulia A.
में प्रकाशित F1000Res (2019)

GeneTack database: genes with frameshifts in prokaryotic genomes and eukaryotic mRNA sequences

द्वारा Antonov, Ivan, Baranov, Pavel, Borodovsky, Mark
प्रकाशित 2013

MetaGeneTack: ab initio detection of frameshifts in metagenomic sequences

द्वारा Tang, Shiyuyun, Antonov, Ivan, Borodovsky, Mark
प्रकाशित 2013

Practical Guidance in Genome-Wide RNA:DNA Triple Helix Prediction

द्वारा Matveishina, Elena, Antonov, Ivan, Medvedeva, Yulia A.
में प्रकाशित Int J Mol Sci (2020)

Analysis of discordant Affymetrix probesets casts serious doubt on idea of microarray data reutilization

द्वारा Marakhonov, Andrey, Sadovskaya, Nataliya, Antonov, Ivan, Baranova, Ancha, Skoblov, Mikhail
में प्रकाशित BMC Genomics (2014)

Identification of the nature of reading frame transitions observed in prokaryotic genomes

द्वारा Antonov, Ivan, Coakley, Arthur, Atkins, John F., Baranov, Pavel V., Borodovsky, Mark
प्रकाशित 2013

Conductive Atomic Force Microscopy Study of the Resistive Switching in Yttria-Stabilized Zirconia Films with Au Nanoparticles

द्वारा Filatov, Dmitry, Kazantseva, Inga, Antonov, Dmitry, Antonov, Ivan, Shenina, Maria, Pavlov, Dmitry, Gorshkov, Oleg
में प्रकाशित Scanning (2018)

A Pilot Study of Bacterial Genes with Disrupted ORFs Reveals a Surprising Profusion of Protein Sequence Recoding Mediated by Ribosomal Frameshifting and Transcriptional Realignment

द्वारा Sharma, Virag, Firth, Andrew E., Antonov, Ivan, Fayet, Olivier, Atkins, John F., Borodovsky, Mark, Baranov, Pavel V.
प्रकाशित 2011

Precisely spun super rotors

द्वारा Antonov, Ivan O., Stollenwerk, Patrick R., Venkataramanababu, Sruthi, de Lima Batista, Ana P., de Oliveira-Filho, Antonio G. S., Odom, Brian C.
में प्रकाशित Nat Commun (2021)

Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi

द्वारा Xu, Junhuan, Linning, Rob, Fellers, John, Dickinson, Matthew, Zhu, Wenhan, Antonov, Ivan, Joly, David L, Donaldson, Michael E, Eilam, Tamar, Anikster, Yehoshua, Banks, Travis, Munro, Sarah, Mayo, Michael, Wynhoven, Brian, Ali, Johar, Moore, Richard, McCallum, Brent, Borodovsky, Mark, Saville, Barry, Bakkeren, Guus
प्रकाशित 2011

The reaction of hydroxyl and methylperoxy radicals is not a major source of atmospheric methanol

द्वारा Caravan, Rebecca L., Khan, M. Anwar H., Zádor, Judit, Sheps, Leonid, Antonov, Ivan O., Rotavera, Brandon, Ramasesha, Krupa, Au, Kendrew, Chen, Ming-Wei, Rösch, Daniel, Osborn, David L., Fittschen, Christa, Schoemaecker, Coralie, Duncianu, Marius, Grira, Asma, Dusanter, Sebastien, Tomas, Alexandre, Percival, Carl J., Shallcross, Dudley E., Taatjes, Craig A.
में प्रकाशित Nat Commun (2018)

Genome Sequences for Five Strains of the Emerging Pathogen Haemophilus haemolyticus

द्वारा Jordan, I. King, Conley, Andrew B., Antonov, Ivan V., Arthur, Robert A., Cook, Erin D., Cooper, Guy P., Jones, Bernard L., Knipe, Kristen M., Lee, Kevin J., Liu, Xing, Mitchell, Gabriel J., Pande, Pushkar R., Petit, Robert A., Qin, Shaopu, Rajan, Vani N., Sarda, Shruti, Sebastian, Aswathy, Tang, Shiyuyun, Thapliyal, Racchit, Varghese, Neha J., Ye, Tianjun, Katz, Lee S., Wang, Xin, Rowe, Lori, Frace, Michael, Mayer, Leonard W.
प्रकाशित 2011

Functional annotation of human long noncoding RNAs via molecular phenotyping

द्वारा Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Sánchez Martinez, Diego Fernando, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
में प्रकाशित Genome Res (2020)

Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping

द्वारा Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Ciani, Yari, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Ouyang, John F., Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Abugessaisa, Imad, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Ducoli, Luca, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Handoko, Lusy, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawaji, Hideya, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Kondo, Naoto, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Maeda, Shiori, Makeev, Vsevolod J., Marchionni, Luigi, Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Noro, Yukihiko, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Martinez, Diego Fernando Sánchez, Sandelin, Albin, Sanjana, Pillay, Semple, Colin A.M., Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Tripathi, Vidisha, Ulitsky, Igor, Verardo, Roberto, Vorontsov, Ilya E., Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kauppinen, Sakari, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Suzuki, Harukazu, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
में प्रकाशित Genome Res (2020)