Screening and personalizing nootropic drugs and cognitive modulator regimens in silico

by Jellen, Leslie C., Aliper, Alexander, Buzdin, Anton, Zhavoronkov, Alex
Published in Front Syst Neurosci (2015)

Evaluation of the geroprotective effects of withaferin A in Drosophila melanogaster

by Koval, Liubov, Zemskaya, Nadezhda, Aliper, Alexander, Zhavoronkov, Alex, Moskalev, Alexey
Published in Aging (Albany NY) (2021)

Deep learning applications for predicting pharmacological properties of drugs and drug repurposing using transcriptomic data

by Aliper, Alexander, Plis, Sergey, Artemov, Artem, Ulloa, Alvaro, Mamoshina, Polina, Zhavoronkov, Alex
Published in Mol Pharm (2016)

Pathway activation profiling reveals new insights into Age-related Macular Degeneration and provides avenues for therapeutic interventions

by Makarev, Evgeny, Cantor, Charles, Zhavoronkov, Alex, Buzdin, Anton, Aliper, Alexander, Csoka, Antonei Benjamin
Published in Aging (Albany NY) (2014)

Replicative and radiation-induced aging: a comparison of gene expression profiles

by Aliper, Alexander M., Bozdaganyan, Marine E., Orekhov, Philipp S., Zhavoronkov, Alex, Osipov, Andreyan N.
Published in Aging (Albany NY) (2019)

Genetics and epigenetics of aging and longevity

by Moskalev, Alexey A, Aliper, Alexander M, Smit-McBride, Zeljka, Buzdin, Anton, Zhavoronkov, Alex
Published 2014

Interactome analysis of myeloid-derived suppressor cells in murine models of colon and breast cancer

by Aliper, Alexander M., Frieden-Korovkina, Victoria P., Buzdin, Anton, Roumiantsev, Sergey A., Zhavoronkov, Alex
Published in Oncotarget (2014)

Exhaustive data mining comparison of the effects of low doses of ionizing radiation, formaldehyde and dioxins

by Moskalev, Alexey, Shaposhnikov, Mikhail, Plyusnina, Ekaterina, Plyusnin, Sergey, Shostal, Olga, Aliper, Alexander, Zhavoronkov, Alex
Published in BMC Genomics (2014)

A role for G-CSF and GM-CSF in nonmyeloid cancers

by Aliper, Alexander M, Frieden-Korovkina, Victoria P, Buzdin, Anton, Roumiantsev, Sergey A, Zhavoronkov, Alex
Published in Cancer Med (2014)

The cornucopia of meaningful leads: Applying deep adversarial autoencoders for new molecule development in oncology

by Kadurin, Artur, Aliper, Alexander, Kazennov, Andrey, Mamoshina, Polina, Vanhaelen, Quentin, Khrabrov, Kuzma, Zhavoronkov, Alex
Published in Oncotarget (2016)

Molecular Generation for Desired Transcriptome Changes With Adversarial Autoencoders

by Shayakhmetov, Rim, Kuznetsov, Maksim, Zhebrak, Alexander, Kadurin, Artur, Nikolenko, Sergey, Aliper, Alexander, Polykovskiy, Daniil
Published in Front Pharmacol (2020)

Addendum: Molecular Generation for Desired Transcriptome Changes With Adversarial Autoencoders

by Shayakhmetov, Rim, Kuznetsov, Maksim, Zhebrak, Alexander, Kadurin, Artur, Nikolenko, Sergey, Aliper, Alexander, Polykovskiy, Daniil
Published in Front Pharmacol (2020)

Molecular aspects of development and regulation of endometriosis

by Aznaurova, Yana B, Zhumataev, Marat B, Roberts, Tiffany K, Aliper, Alexander M, Zhavoronkov, Alex A
Published 2014

Signaling pathway activation drift during aging: Hutchinson-Gilford Progeria Syndrome fibroblasts are comparable to normal middle-age and old-age cells

by Aliper, Alexander M., Csoka, Antonei Benjamin, Buzdin, Anton, Jetka, Tomasz, Roumiantsev, Sergey, Moskalev, Alexey, Zhavoronkov, Alex
Published in Aging (Albany NY) (2015)

Towards natural mimetics of metformin and rapamycin

by Aliper, Alexander, Jellen, Leslie, Cortese, Franco, Artemov, Artem, Karpinsky-Semper, Darla, Moskalev, Alexey, Swick, Andrew G., Zhavoronkov, Alex
Published in Aging (Albany NY) (2017)

Pathway activation strength is a novel independent prognostic biomarker for cetuximab sensitivity in colorectal cancer patients

by Zhu, Qingsong, Izumchenko, Evgeny, Aliper, Alexander M, Makarev, Evgeny, Paz, Keren, Buzdin, Anton A, Zhavoronkov, Alex A, Sidransky, David
Published in Hum Genome Var (2015)

Deep biomarkers of human aging: Application of deep neural networks to biomarker development

by Putin, Evgeny, Mamoshina, Polina, Aliper, Alexander, Korzinkin, Mikhail, Moskalev, Alexey, Kolosov, Alexey, Ostrovskiy, Alexander, Cantor, Charles, Vijg, Jan, Zhavoronkov, Alex
Published in Aging (Albany NY) (2016)

Combinatorial high-throughput experimental and bioinformatic approach identifies molecular pathways linked with the sensitivity to anticancer target drugs

by Venkova, Larisa, Aliper, Alexander, Suntsova, Maria, Kholodenko, Roman, Shepelin, Denis, Borisov, Nicolas, Malakhova, Galina, Vasilov, Raif, Roumiantsev, Sergey, Zhavoronkov, Alex, Buzdin, Anton
Published in Oncotarget (2015)

A method for predicting target drug efficiency in cancer based on the analysis of signaling pathway activation

by Artemov, Artem, Aliper, Alexander, Korzinkin, Michael, Lezhnina, Ksenia, Jellen, Leslie, Zhukov, Nikolay, Roumiantsev, Sergey, Gaifullin, Nurshat, Zhavoronkov, Alex, Borisov, Nicolas, Buzdin, Anton
Published in Oncotarget (2015)

The OncoFinder algorithm for minimizing the errors introduced by the high-throughput methods of transcriptome analysis

by Buzdin, Anton A., Zhavoronkov, Alex A., Korzinkin, Mikhail B., Roumiantsev, Sergey A., Aliper, Alexander M., Venkova, Larisa S., Smirnov, Philip Y., Borisov, Nikolay M.
Published in Front Mol Biosci (2014)