Nested sampling for parameter inference in systems biology: application to an exemplar circadian model

af Aitken, Stuart, Akman, Ozgur E
Udgivet 2013

Optimisation of an exemplar oculomotor model using multi-objective genetic algorithms executed on a GPU-CPU combination

af Avramidis, Eleftherios, Akman, Ozgur E.
Udgivet i BMC Syst Biol (2017)

Slow–fast control of eye movements: an instance of Zeeman’s model for an action

af Clement, Richard A., Akman, Ozgur E.
Udgivet i Biol Cybern (2020)

Dizzy-Beats: a Bayesian evidence analysis tool for systems biology

af Aitken, Stuart, Kilpatrick, Alastair M., Akman, Ozgur E.
Udgivet i Bioinformatics (2015)

A simplified modelling framework facilitates more complex representations of plant circadian clocks

af Foo, Mathias, Bates, Declan G., Akman, Ozgur E.
Udgivet i PLoS Comput Biol (2020)

Stochastic models of cellular circadian rhythms in plants help to understand the impact of noise on robustness and clock structure

af Guerriero, Maria L., Akman, Ozgur E., van Ooijen, Gerben
Udgivet 2014

Nonlinear Dynamics in Gene Regulation Promote Robustness and Evolvability of Gene Expression Levels

af Steinacher, Arno, Bates, Declan G., Akman, Ozgur E., Soyer, Orkun S.
Udgivet i PLoS One (2016)

Ultrasensitive Negative Feedback Control: A Natural Approach for the Design of Synthetic Controllers

af Montefusco, Francesco, Akman, Ozgur E., Soyer, Orkun S., Bates, Declan G.
Udgivet i PLoS One (2016)

Peeking into Pit Fields: A Multiple Twinning Model of Secondary Plasmodesmata Formation in Tobacco

af Faulkner, Christine, Akman, Ozgur E., Bell, Karen, Jeffree, Chris, Oparka, Karl
Udgivet 2008

Robustness from flexibility in the fungal circadian clock

af Akman, Ozgur E, Rand, David A, Brown, Paul E, Millar, Andrew J
Udgivet 2010

Analysing nystagmus waveforms: a computational framework

af Abadi, Richard V., Akman, Ozgur E., Arblaster, Gemma E., Clement, Richard A.
Udgivet i Sci Rep (2021)

Corrigendum for the paper ‘Digital clocks: simple Boolean models can quantitatively describe circadian systems’

af Akman, Ozgur E., Watterson, Steven, Parton, Andrew, Binns, Nigel, Millar, Andrew J., Ghazal, Peter
Udgivet 2012

Digital clocks: simple Boolean models can quantitatively describe circadian systems

af Akman, Ozgur E., Watterson, Steven, Parton, Andrew, Binns, Nigel, Millar, Andrew J., Ghazal, Peter
Udgivet 2012

Isoform switching facilitates period control in the Neurospora crassa circadian clock

af Akman, Ozgur E, Locke, James CW, Tang, Sanyi, Carré, Isabelle, Millar, Andrew J, Rand, David A
Udgivet 2008

Isoform switching facilitates period control in the Neurospora crassa circadian clock

af Akman, Ozgur E, Locke, James C W, Tang, Sanyi, Carré, Isabelle, Millar, Andrew J, Rand, David A
Udgivet 2008

Light and circadian regulation of clock components aids flexible responses to environmental signals

af Dixon, Laura E, Hodge, Sarah K, van Ooijen, Gerben, Troein, Carl, Akman, Ozgur E, Millar, Andrew J
Udgivet i New Phytol (2014)

Mapping epigenetic changes to the host cell genome induced by Burkholderia pseudomallei reveals pathogen-specific and pathogen-generic signatures of infection

af Cizmeci, Deniz, Dempster, Emma L., Champion, Olivia L., Wagley, Sariqa, Akman, Ozgur E., Prior, Joann L., Soyer, Orkun S., Mill, Jonathan, Titball, Richard W.
Udgivet i Sci Rep (2016)

Quantification and Selection of Ictogenic Zones in Epilepsy Surgery

af Laiou, Petroula, Avramidis, Eleftherios, Lopes, Marinho A., Abela, Eugenio, Müller, Michael, Akman, Ozgur E., Richardson, Mark P., Rummel, Christian, Schindler, Kaspar, Goodfellow, Marc
Udgivet i Front Neurol (2019)

Quantitative analysis of regulatory flexibility under changing environmental conditions

af Edwards, Kieron D, Akman, Ozgur E, Knox, Kirsten, Lumsden, Peter J, Thomson, Adrian W, Brown, Paul E, Pokhilko, Alexandra, Kozma-Bognar, Laszlo, Nagy, Ferenc, Rand, David A, Millar, Andrew J
Udgivet 2010

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

af Adams, Richard, Clark, Allan, Yamaguchi, Azusa, Hanlon, Neil, Tsorman, Nikos, Ali, Shakir, Lebedeva, Galina, Goltsov, Alexey, Sorokin, Anatoly, Akman, Ozgur E., Troein, Carl, Millar, Andrew J., Goryanin, Igor, Gilmore, Stephen
Udgivet 2013