Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA

BACKGROUND: Sites in DNA that bind regulatory proteins can be detected computationally in various ways. Pattern discovery methods analyze collections of genes suspected to be co-regulated on the evidence, for example, of clustering of transcriptome data. Pattern searching methods use sequences with...

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Bibliographic Details

Published in:	Genome Biol
Main Authors:	Benítez-Bellón, Esperanza, Moreno-Hagelsieb, Gabriel, Collado-Vides, Julio
Format:	Artigo
Language:	Inglês
Published:	BMC 2002
Subjects:	Research
Online Access:	https://ncbi.nlm.nih.govhttps://pmc.ncbi.nlm.nih.gov/articles/PMC88811/ https://ncbi.nlm.nih.govhttps://pubmed.ncbi.nlm.nih.gov/11897025/ https://ncbi.nlm.nih.govhttps://doi.org/10.1186/gb-2002-3-3-research0013
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