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SMNN: batch effect correction for single-cell RNA-seq data via supervised mutual nearest neighbor detection

Batch effect correction has been recognized to be indispensable when integrating single-cell RNA sequencing (scRNA-seq) data from multiple batches. State-of-the-art methods ignore single-cell cluster label information, but such information can improve the effectiveness of batch effect correction, pa...

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Detalhes bibliográficos
Publicado no:Brief Bioinform
Main Authors: Yang, Yuchen, Li, Gang, Qian, Huijun, Wilhelmsen, Kirk C, Shen, Yin, Li, Yun
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC8324985/
https://ncbi.nlm.nih.gov/pubmed/32591778
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bib/bbaa097
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