GUNC: detection of chimerism and contamination in prokaryotic genomes

Genomes are critical units in microbiology, yet ascertaining quality in prokaryotic genome assemblies remains a formidable challenge. We present GUNC (the Genome UNClutterer), a tool that accurately detects and quantifies genome chimerism based on the lineage homogeneity of individual contigs using...

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Bibliografiset tiedot
Julkaisussa:Genome Biol
Päätekijät: Orakov, Askarbek, Fullam, Anthony, Coelho, Luis Pedro, Khedkar, Supriya, Szklarczyk, Damian, Mende, Daniel R., Schmidt, Thomas S. B., Bork, Peer
Aineistotyyppi: Artigo
Kieli:Inglês
Julkaistu: BioMed Central 2021
Aiheet:
Method
Linkit:https://ncbi.nlm.nih.gov/pmc/articles/PMC8201837/
https://ncbi.nlm.nih.gov/pubmed/34120611
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-021-02393-0
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