WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates

BACKGROUND: Bacterial plasmids often carry antibiotic resistance genes and are a significant factor in the spread of antibiotic resistance. The ability to completely assemble plasmid sequences would facilitate the localization of antibiotic resistance genes, the identification of genes that promote...

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Bibliografiska uppgifter
I publikationen:BMC Microbiol
Huvudupphovsmän: Heikema, Astrid P., Jansen, Rick, Hiltemann, Saskia D., Hays, John P., Stubbs, Andrew P.
Materialtyp: Artigo
Språk:Inglês
Publicerad: BioMed Central 2021
Ämnen:
Software
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC8186029/
https://ncbi.nlm.nih.gov/pubmed/34098864
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12866-021-02225-y
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