A Benchmark of Genetic Variant Calling Pipelines Using Metagenomic Short-Read Sequencing

Microbes live in complex communities that are of major importance for environmental ecology, public health, and animal physiology and pathology. Short-read metagenomic shotgun sequencing is currently the state-of-the-art technique for exploring these communities. With the aid of metagenomics, our un...

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Bibliographic Details
Published in:Front Genet
Main Authors: Andreu-Sánchez, Sergio, Chen, Lianmin, Wang, Daoming, Augustijn, Hannah E., Zhernakova, Alexandra, Fu, Jingyuan
Format: Artigo
Language:Inglês
Published: Frontiers Media S.A. 2021
Subjects:
Genetics
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC8141913/
https://ncbi.nlm.nih.gov/pubmed/34040632
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fgene.2021.648229
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