OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters

The interplay between shrimp immune system, its environment, and microbiota contributes to the organism’s homeostasis and optimal production. The metagenomic composition is typically studied using 16S rDNA profiling by clustering amplicon sequences into operational taxonomic units (OTUs) and, more r...

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Bibliografiske detaljer
Udgivet i:Genes (Basel)
Main Authors: García-López, Rodrigo, Cornejo-Granados, Fernanda, Lopez-Zavala, Alonso A., Cota-Huízar, Andrés, Sotelo-Mundo, Rogerio R., Gómez-Gil, Bruno, Ochoa-Leyva, Adrian
Format: Artigo
Sprog:Inglês
Udgivet: MDPI 2021
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Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC8070570/
https://ncbi.nlm.nih.gov/pubmed/33924545
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3390/genes12040564
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