FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences

BACKGROUND: Gene annotation in eukaryotes is a non-trivial task that requires meticulous analysis of accumulated transcript data. Challenges include transcriptionally active regions of the genome that contain overlapping genes, genes that produce numerous transcripts, transposable elements and numer...

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Veröffentlicht in:BMC Bioinformatics
Hauptverfasser: Banerjee, Sagnik, Bhandary, Priyanka, Woodhouse, Margaret, Sen, Taner Z., Wise, Roger P., Andorf, Carson M.
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2021
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Software
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC8056616/
https://ncbi.nlm.nih.gov/pubmed/33879057
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-021-04120-9
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