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aCLImatise: automated generation of tool definitions for bioinformatics workflows

SUMMARY: aCLImatise is a utility for automatically generating tool definitions compatible with bioinformatics workflow languages, by parsing command-line help output. aCLImatise also has an associated database called the aCLImatise Base Camp, which provides thousands of pre-computed tool definitions...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Milton, Michael, Thorne, Natalie
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC8016486/
https://ncbi.nlm.nih.gov/pubmed/33325479
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa1033
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