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Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups

In this study, more than one hundred thousand Escherichia coli and Shigella genomes were examined and classified. This is, to our knowledge, the largest E. coli genome dataset analyzed to date. A Mash-based analysis of a cleaned set of 10,667 E. coli genomes from GenBank revealed 14 distinct phylogr...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:Commun Biol
Main Authors: Abram, Kaleb, Udaondo, Zulema, Bleker, Carissa, Wanchai, Visanu, Wassenaar, Trudy M., Robeson, Michael S., Ussery, David W.
Format: Artigo
Jezik:Inglês
Izdano: Nature Publishing Group UK 2021
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC7838162/
https://ncbi.nlm.nih.gov/pubmed/33500552
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s42003-020-01626-5
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