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BlastFrost: fast querying of 100,000s of bacterial genomes in Bifrost graphs
BlastFrost is a highly efficient method for querying 100,000s of genome assemblies, building on Bifrost, a dynamic data structure for compacted and colored de Bruijn graphs. BlastFrost queries a Bifrost data structure for sequences of interest and extracts local subgraphs, enabling the identificatio...
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| Publicado no: | Genome Biol |
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| Main Authors: | , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BioMed Central
2021
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7798312/ https://ncbi.nlm.nih.gov/pubmed/33430919 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-02237-3 |
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