GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography

SUMMARY: We present GeoBoost2, a natural language-processing pipeline for extracting the location of infected hosts for enriching metadata in nucleotide sequences repositories like National Center of Biotechnology Information’s GenBank for downstream analysis including phylogeography and genomic epi...

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Bibliografiske detaljer
Udgivet i:Bioinformatics
Main Authors: Magge, Arjun, Weissenbacher, Davy, O’Connor, Karen, Tahsin, Tasnia, Gonzalez-Hernandez, Graciela, Scotch, Matthew
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2020
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Applications Notes
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7755405/
https://ncbi.nlm.nih.gov/pubmed/32683454
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa647
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