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Improving CLIP-seq data analysis by incorporating transcript information

BACKGROUND: Current peak callers for identifying RNA-binding protein (RBP) binding sites from CLIP-seq data take into account genomic read profiles, but they ignore the underlying transcript information, that is information regarding splicing events. So far, there are no studies available that close...

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Detalhes bibliográficos
Publicado no:BMC Genomics
Main Authors: Uhl, Michael, Tran, Van Dinh, Backofen, Rolf
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7745353/
https://ncbi.nlm.nih.gov/pubmed/33334306
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-020-07297-0
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