Identification of bona fide B2 SINE retrotransposon transcription through single-nucleus RNA-seq of the mouse hippocampus

Currently, researchers rely on generalized methods to quantify transposable element (TE) RNA expression, such as RT-qPCR and RNA-seq, that do not distinguish between TEs expressed from their own promoter (bona fide) and TEs that are transcribed from a neighboring gene promoter such as within an intr...

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Veröffentlicht in:Genome Res
Hauptverfasser: Linker, Sara B., Randolph-Moore, Lynne, Kottilil, Kalyani, Qiu, Fan, Jaeger, Baptiste N., Barron, Jerika, Gage, Fred H.
Format: Artigo
Sprache:Inglês
Veröffentlicht: Cold Spring Harbor Laboratory Press 2020
Schlagworte:
Method
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7605253/
https://ncbi.nlm.nih.gov/pubmed/33122305
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.262196.120
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