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idCOV: a pipeline for quick clade identification of SARS-CoV-2 isolates
idCOV is a phylogenetic pipeline for quickly identifying the clades of SARS-CoV-2 virus isolates from raw sequencing data based on a selected clade-defining marker list. Using a public dataset, we show that idCOV can make equivalent calls as annotated by Nextstrain.org on all three common clade syst...
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| Publicado no: | bioRxiv |
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| Main Authors: | , , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
Cold Spring Harbor Laboratory
2020
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7553160/ https://ncbi.nlm.nih.gov/pubmed/33052335 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/2020.10.08.330456 |
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