RNAIndel: discovering somatic coding indels from tumor RNA-Seq data

MOTIVATION: Reliable identification of expressed somatic insertions/deletions (indels) is an unmet need due to artifacts generated in PCR-based RNA-Seq library preparation and the lack of normal RNA-Seq data, presenting analytical challenges for discovery of somatic indels in tumor transcriptome. RE...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Hagiwara, Kohei, Ding, Liang, Edmonson, Michael N, Rice, Stephen V, Newman, Scott, Easton, John, Dai, Juncheng, Meshinchi, Soheil, Ries, Rhonda E, Rusch, Michael, Zhang, Jinghui
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2019
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Original Papers
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7523641/
https://ncbi.nlm.nih.gov/pubmed/31593214
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btz753
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