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GraphAligner: rapid and versatile sequence-to-graph alignment

Genome graphs can represent genetic variation and sequence uncertainty. Aligning sequences to genome graphs is key to many applications, including error correction, genome assembly, and genotyping of variants in a pangenome graph. Yet, so far, this step is often prohibitively slow. We present GraphA...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Rautiainen, Mikko, Marschall, Tobias
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7513500/
https://ncbi.nlm.nih.gov/pubmed/32972461
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-02157-2
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