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gsufsort: constructing suffix arrays, LCP arrays and BWTs for string collections

BACKGROUND: The construction of a suffix array for a collection of strings is a fundamental task in Bioinformatics and in many other applications that process strings. Related data structures, as the Longest Common Prefix array, the Burrows–Wheeler transform, and the document array, are often needed...

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Detalles Bibliográficos
Publicado en:Algorithms Mol Biol
Main Authors: Louza, Felipe A., Telles, Guilherme P., Gog, Simon, Prezza, Nicola, Rosone, Giovanna
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2020
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC7507297/
https://ncbi.nlm.nih.gov/pubmed/32973918
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-020-00177-y
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