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gsufsort: constructing suffix arrays, LCP arrays and BWTs for string collections

BACKGROUND: The construction of a suffix array for a collection of strings is a fundamental task in Bioinformatics and in many other applications that process strings. Related data structures, as the Longest Common Prefix array, the Burrows–Wheeler transform, and the document array, are often needed...

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書目詳細資料
發表在:Algorithms Mol Biol
Main Authors: Louza, Felipe A., Telles, Guilherme P., Gog, Simon, Prezza, Nicola, Rosone, Giovanna
格式: Artigo
語言:Inglês
出版: BioMed Central 2020
主題:
在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC7507297/
https://ncbi.nlm.nih.gov/pubmed/32973918
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-020-00177-y
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