UMI-Gen: A UMI-based read simulator for variant calling evaluation in paired-end sequencing NGS libraries

MOTIVATION: With Next Generation Sequencing becoming more affordable every year, NGS technologies asserted themselves as the fastest and most reliable way to detect Single Nucleotide Variants (SNV) and Copy Number Variations (CNV) in cancer patients. These technologies can be used to sequence DNA at...

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Detalhes bibliográficos
Publicado no:Comput Struct Biotechnol J
Main Authors: Sater, Vincent, Viailly, Pierre-Julien, Lecroq, Thierry, Ruminy, Philippe, Bérard, Caroline, Prieur-Gaston, Élise, Jardin, Fabrice
Formato: Artigo
Idioma:Inglês
Publicado em: Research Network of Computational and Structural Biotechnology 2020
Assuntos:
Research Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7484502/
https://ncbi.nlm.nih.gov/pubmed/32952940
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.csbj.2020.08.011
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