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Evaluation of methods for detecting human reads in microbial sequencing datasets

Sequencing data from host-associated microbes can often be contaminated by the body of the investigator or research subject. Human DNA is typically removed from microbial reads either by subtractive alignment (dropping all reads that map to the human genome) or by using a read classification tool to...

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Publicat a:Microb Genom
Autors principals: Bush, Stephen J., Connor, Thomas R., Peto, Tim E.A., Crook, Derrick W., Walker, A. Sarah
Format: Artigo
Idioma:Inglês
Publicat: Microbiology Society 2020
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7478626/
https://ncbi.nlm.nih.gov/pubmed/32558637
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000393
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