Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study

Culture-independent diagnostics, such as metagenomic shotgun sequencing of food samples, could not only reduce the turnaround time of samples in an outbreak investigation, but also allow the detection of multi-species and multi-strain outbreaks. For successful foodborne outbreak investigation using...

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Detalhes bibliográficos
Publicado no:Int J Mol Sci
Main Authors: Saltykova, Assia, Buytaers, Florence E., Denayer, Sarah, Verhaegen, Bavo, Piérard, Denis, Roosens, Nancy H. C., Marchal, Kathleen, De Keersmaecker, Sigrid C. J.
Formato: Artigo
Idioma:Inglês
Publicado em: MDPI 2020
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Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7460976/
https://ncbi.nlm.nih.gov/pubmed/32784459
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3390/ijms21165688
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