Detecting sample swaps in diverse NGS data types using linkage disequilibrium

As the number of genomics datasets grows rapidly, sample mislabeling has become a high stakes issue. We present CrosscheckFingerprints (Crosscheck), a tool for quantifying sample-relatedness and detecting incorrectly paired sequencing datasets from different donors. Crosscheck outperforms similar me...

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Bibliografiska uppgifter
I publikationen:Nat Commun
Huvudupphovsmän: Javed, Nauman, Farjoun, Yossi, Fennell, Tim J., Epstein, Charles B., Bernstein, Bradley E., Shoresh, Noam
Materialtyp: Artigo
Språk:Inglês
Publicerad: Nature Publishing Group UK 2020
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Article
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC7391710/
https://ncbi.nlm.nih.gov/pubmed/32728101
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41467-020-17453-5
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