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SHOGUN: a modular, accurate and scalable framework for microbiome quantification

SUMMARY: The software pipeline SHOGUN profiles known taxonomic and gene abundances of short-read shotgun metagenomics sequencing data. The pipeline is scalable, modular and flexible. Data analysis and transformation steps can be run individually or together in an automated workflow. Users can easily...

詳細記述

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書誌詳細
出版年:Bioinformatics
主要な著者: Hillmann, Benjamin, Al-Ghalith, Gabriel A, Shields-Cutler, Robin R, Zhu, Qiyun, Knight, Rob, Knights, Dan
フォーマット: Artigo
言語:Inglês
出版事項: Oxford University Press 2020
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC7359755/
https://ncbi.nlm.nih.gov/pubmed/32365167
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa277
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