ganon: precise metagenomics classification against large and up-to-date sets of reference sequences

MOTIVATION: The exponential growth of assembled genome sequences greatly benefits metagenomics studies. However, currently available methods struggle to manage the increasing amount of sequences and their frequent updates. Indexing the current RefSeq can take days and hundreds of GB of memory on lar...

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Bibliografske podrobnosti
izdano v:Bioinformatics
Main Authors: Piro, Vitor C, Dadi, Temesgen H, Seiler, Enrico, Reinert, Knut, Renard, Bernhard Y
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2020
Teme:
Bioinformatics of Microbes and Microbiomes
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC7355301/
https://ncbi.nlm.nih.gov/pubmed/32657362
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa458
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