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MACPET: model-based analysis for ChIA-PET

We present model-based analysis for ChIA-PET (MACPET), which analyzes paired-end read sequences provided by ChIA-PET for finding binding sites of a protein of interest. MACPET uses information from both tags of each PET and searches for binding sites in a two-dimensional space, while taking into acc...

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Bibliografiske detaljer
Udgivet i:Biostatistics
Main Authors: Vardaxis, Ioannis, Drabløs, Finn, Rye, Morten B, Lindqvist, Bo Henry
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2019
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7308020/
https://ncbi.nlm.nih.gov/pubmed/30698663
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/biostatistics/kxy084
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