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Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

BACKGROUND: The low cost of 16S rRNA gene sequencing facilitates population-scale molecular epidemiological studies. Existing computational algorithms can resolve 16S rRNA gene sequences into high-resolution amplicon sequence variants (ASVs), which represent consistent labels comparable across studi...

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Publicat a:Microbiome
Autors principals: F. Escapa, Isabel, Huang, Yanmei, Chen, Tsute, Lin, Maoxuan, Kokaras, Alexis, Dewhirst, Floyd E., Lemon, Katherine P.
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2020
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7291764/
https://ncbi.nlm.nih.gov/pubmed/32414415
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-020-00841-w
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