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Evaluation of STAR and Kallisto on Single Cell RNA-Seq Data Alignment

Alignment of scRNA-Seq data are the first and one of the most critical steps of the scRNA-Seq analysis workflow, and thus the choice of proper aligners is of paramount importance. Recently, STAR an alignment method and Kallisto a pseudoalignment method have both gained a vast amount of popularity in...

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Publicat a:G3 (Bethesda)
Autors principals: Du, Yuheng, Huang, Qianhui, Arisdakessian, Cedric, Garmire, Lana X.
Format: Artigo
Idioma:Inglês
Publicat: Genetics Society of America 2020
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7202009/
https://ncbi.nlm.nih.gov/pubmed/32220951
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1534/g3.120.401160
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