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APPLES: Scalable Distance-Based Phylogenetic Placement with or without Alignments

Placing a new species on an existing phylogeny has increasing relevance to several applications. Placement can be used to update phylogenies in a scalable fashion and can help identify unknown query samples using (meta-)barcoding, skimming, or metagenomic data. Maximum likelihood (ML) methods of phy...

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Bibliografiske detaljer
Udgivet i:Syst Biol
Main Authors: Balaban, Metin, Sarmashghi, Shahab, Mirarab, Siavash
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2020
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7164367/
https://ncbi.nlm.nih.gov/pubmed/31545363
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/sysbio/syz063
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