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Decontamination of ambient RNA in single-cell RNA-seq with DecontX

Droplet-based microfluidic devices have become widely used to perform single-cell RNA sequencing (scRNA-seq). However, ambient RNA present in the cell suspension can be aberrantly counted along with a cell’s native mRNA and result in cross-contamination of transcripts between different cell populati...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Yang, Shiyi, Corbett, Sean E., Koga, Yusuke, Wang, Zhe, Johnson, W Evan, Yajima, Masanao, Campbell, Joshua D.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2020
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Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7059395/
https://ncbi.nlm.nih.gov/pubmed/32138770
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-1950-6
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