The Utility of Graph Clustering of 5S Ribosomal DNA Homoeologs in Plant Allopolyploids, Homoploid Hybrids, and Cryptic Introgressants

INTRODUCTION: Ribosomal DNA (rDNA) loci have been widely used for identification of allopolyploids and hybrids, although few of these studies employed high-throughput sequencing data. Here we use graph clustering implemented in the RepeatExplorer (RE) pipeline to analyze homoeologous 5S rDNA arrays...

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Publicat a:Front Plant Sci
Autors principals: Garcia, Sònia, Wendel, Jonathan F., Borowska-Zuchowska, Natalia, Aïnouche, Malika, Kuderova, Alena, Kovarik, Ales
Format: Artigo
Idioma:Inglês
Publicat: Frontiers Media S.A. 2020
Matèries:
Plant Science
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7025596/
https://ncbi.nlm.nih.gov/pubmed/32117380
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fpls.2020.00041
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