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BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

BACKGROUND: RNA sequencing has become an increasingly affordable way to profile gene expression patterns. Here we introduce a workflow implementing several open-source softwares that can be run on a high performance computing environment. RESULTS: Developed as a tool by the Bioinformatics Shared Res...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Gadepalli, Venkat Sundar, Ozer, Hatice Gulcin, Yilmaz, Ayse Selen, Pietrzak, Maciej, Webb, Amy
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2019
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6923898/
https://ncbi.nlm.nih.gov/pubmed/31861980
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-3251-1
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