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Computational pan-genome mapping and pairwise SNP-distance improve detection of Mycobacterium tuberculosis transmission clusters

Next-generation sequencing based base-by-base distance measures have become an integral complement to epidemiological investigation of infectious disease outbreaks. This study introduces PANPASCO, a computational pan-genome mapping based, pairwise distance method that is highly sensitive to differen...

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Bibliografiske detaljer
Udgivet i:PLoS Comput Biol
Main Authors: Jandrasits, Christine, Kröger, Stefan, Haas, Walter, Renard, Bernhard Y.
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2019
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6922483/
https://ncbi.nlm.nih.gov/pubmed/31815935
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1007527
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