Backward compatibility of whole genome sequencing data with MLVA typing using a new MLVAtype shiny application for Vibrio cholerae

BACKGROUND: Multiple-Locus Variable Number of Tandem Repeats (VNTR) Analysis (MLVA) is widely used by laboratory-based surveillance networks for subtyping pathogens causing foodborne and water-borne disease outbreaks. However, Whole Genome Sequencing (WGS) has recently emerged as the new more powerf...

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Dettagli Bibliografici
Pubblicato in:PLoS One
Autori principali: Ambroise, Jérôme, Irenge, Léonid M., Durant, Jean-François, Bearzatto, Bertrand, Bwire, Godfrey, Stine, O. Colin, Gala, Jean-Luc
Natura: Artigo
Lingua:Inglês
Pubblicazione: Public Library of Science 2019
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Research Article
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6905556/
https://ncbi.nlm.nih.gov/pubmed/31825986
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0225848
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