Identification and quantitation of clinically relevant microbes in patient samples: Comparison of three k-mer based classifiers for speed, accuracy, and sensitivity

Infections are a serious health concern worldwide, particularly in vulnerable populations such as the immunocompromised, elderly, and young. Advances in metagenomic sequencing availability, speed, and decreased cost offer the opportunity to supplement or even replace culture-based identification of...

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Bibliografiske detaljer
Udgivet i:PLoS Comput Biol
Main Authors: Watts, George S., Thornton, James E., Youens-Clark, Ken, Ponsero, Alise J., Slepian, Marvin J., Menashi, Emmanuel, Hu, Charles, Deng, Wuquan, Armstrong, David G., Reed, Spenser, Cranmer, Lee D., Hurwitz, Bonnie L.
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2019
Fag:
Research Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6897419/
https://ncbi.nlm.nih.gov/pubmed/31756192
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006863
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