Identification and quantitation of clinically relevant microbes in patient samples: Comparison of three k-mer based classifiers for speed, accuracy, and sensitivity

Infections are a serious health concern worldwide, particularly in vulnerable populations such as the immunocompromised, elderly, and young. Advances in metagenomic sequencing availability, speed, and decreased cost offer the opportunity to supplement or even replace culture-based identification of...

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Publicado en:PLoS Comput Biol
Autores principales: Watts, George S., Thornton, James E., Youens-Clark, Ken, Ponsero, Alise J., Slepian, Marvin J., Menashi, Emmanuel, Hu, Charles, Deng, Wuquan, Armstrong, David G., Reed, Spenser, Cranmer, Lee D., Hurwitz, Bonnie L.
Formato: Artigo
Lenguaje:Inglês
Publicado: Public Library of Science 2019
Materias:
Research Article
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC6897419/
https://ncbi.nlm.nih.gov/pubmed/31756192
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006863
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