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Supervised classification enables rapid annotation of cell atlases

Single cell molecular profiling technologies are gaining rapid traction, but the manual process by which resulting cell types are typically annotated is labor-intensive and rate-limiting. We describe Garnett, an algorithm and accompanying software for rapidly annotating cell types in scRNA-seq and s...

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Publié dans:Nat Methods
Auteurs principaux: Pliner, Hannah A., Shendure, Jay, Trapnell, Cole
Format: Artigo
Langue:Inglês
Publié: 2019
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC6791524/
https://ncbi.nlm.nih.gov/pubmed/31501545
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41592-019-0535-3
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