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A survey and evaluations of histogram-based statistics in alignment-free sequence comparison

MOTIVATION: Since the dawn of the bioinformatics field, sequence alignment scores have been the main method for comparing sequences. However, alignment algorithms are quadratic, requiring long execution time. As alternatives, scientists have developed tens of alignment-free statistics for measuring...

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Detalhes bibliográficos
Publicado no:Brief Bioinform
Main Authors: Luczak, Brian B, James, Benjamin T, Girgis, Hani Z
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6781583/
https://ncbi.nlm.nih.gov/pubmed/29220512
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bib/bbx161
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