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octoFLU: Automated Classification for the Evolutionary Origin of Influenza A Virus Gene Sequences Detected in U.S. Swine

The diversity of the 8 genes of influenza A viruses (IAV) in swine reflects introductions from nonswine hosts and subsequent antigenic drift and shift. Here, we curated a data set and present a pipeline that assigns evolutionary lineage and genetic clade to query gene segments.

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Detalhes bibliográficos
Publicado no:Microbiol Resour Announc
Main Authors: Chang, Jennifer, Anderson, Tavis K., Zeller, Michael A., Gauger, Phillip C., Vincent, Amy L.
Formato: Artigo
Idioma:Inglês
Publicado em: American Society for Microbiology 2019
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6687928/
https://ncbi.nlm.nih.gov/pubmed/31395641
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/MRA.00673-19
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