Whole-Genome Single-Nucleotide Polymorphism (SNP) Analysis Applied Directly to Stool for Genotyping Shiga Toxin-Producing Escherichia coli: an Advanced Molecular Detection Method for Foodborne Disease Surveillance and Outbreak Tracking

Whole-genome sequencing (WGS) of pathogens from pure culture provides unparalleled accuracy and comprehensive results at a cost that is advantageous compared with traditional diagnostic methods. Sequencing pathogens directly from a primary clinical specimen would help circumvent the need for culture...

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Bibliographische Detailangaben
Veröffentlicht in:J Clin Microbiol
Hauptverfasser: Singh, Navjot, Lapierre, Pascal, Quinlan, Tammy M., Halse, Tanya A., Wirth, Samantha, Dickinson, Michelle C., Lasek-Nesselquist, Erica, Musser, Kimberlee A.
Format: Artigo
Sprache:Inglês
Veröffentlicht: American Society for Microbiology 2019
Schlagworte:
Bacteriology
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6595464/
https://ncbi.nlm.nih.gov/pubmed/31068414
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/JCM.00307-19
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