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The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments
The Genome Analysis Toolkit (GATK) is a popular set of programs for discovering and genotyping variants from next-generation sequencing data. The current GATK recommendation for RNA sequencing (RNA-seq) is to perform variant calling from individual samples, with the drawback that only variable posit...
Guardat en:
| Publicat a: | J Anim Sci Biotechnol |
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| Autors principals: | , , , |
| Format: | Artigo |
| Idioma: | Inglês |
| Publicat: |
BioMed Central
2019
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| Matèries: | |
| Accés en línia: | https://ncbi.nlm.nih.gov/pmc/articles/PMC6587293/ https://ncbi.nlm.nih.gov/pubmed/31249686 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40104-019-0359-0 |
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