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Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics

BACKGROUND: Distributed approaches based on the MapReduce programming paradigm have started to be proposed in the Bioinformatics domain, due to the large amount of data produced by the next-generation sequencing techniques. However, the use of MapReduce and related Big Data technologies and framewor...

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Bibliografski detalji
Izdano u:BMC Bioinformatics
Glavni autori: Ferraro Petrillo, Umberto, Sorella, Mara, Cattaneo, Giuseppe, Giancarlo, Raffaele, Rombo, Simona E.
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2019
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6471689/
https://ncbi.nlm.nih.gov/pubmed/30999863
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-2694-8
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