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Estimating probabilistic context-free grammars for proteins using contact map constraints

Interactions between amino acids that are close in the spatial structure, but not necessarily in the sequence, play important structural and functional roles in proteins. These non-local interactions ought to be taken into account when modeling collections of proteins. Yet the most popular represent...

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Veröffentlicht in:PeerJ
Hauptverfasser: Dyrka, Witold, Pyzik, Mateusz, Coste, François, Talibart, Hugo
Format: Artigo
Sprache:Inglês
Veröffentlicht: PeerJ Inc. 2019
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6428041/
https://ncbi.nlm.nih.gov/pubmed/30918754
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.6559
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