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A multi-task convolutional deep neural network for variant calling in single molecule sequencing

The accurate identification of DNA sequence variants is an important, but challenging task in genomics. It is particularly difficult for single molecule sequencing, which has a per-nucleotide error rate of ~5–15%. Meeting this demand, we developed Clairvoyante, a multi-task five-layer convolutional...

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Detalhes bibliográficos
Publicado no:Nat Commun
Main Authors: Luo, Ruibang, Sedlazeck, Fritz J., Lam, Tak-Wah, Schatz, Michael C.
Formato: Artigo
Idioma:Inglês
Publicado em: Nature Publishing Group UK 2019
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6397153/
https://ncbi.nlm.nih.gov/pubmed/30824707
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41467-019-09025-z
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