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Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and the 16S-ITS-23S of the  rrn operon

Background: Profiling the microbiome of low-biomass samples is challenging for metagenomics since these samples are prone to contain DNA from other sources (e.g. host or environment). The usual approach is sequencing short regions of the 16S rRNA gene, which fails to assign taxonomy to genus and spe...

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Bibliographische Detailangaben
Veröffentlicht in:F1000Res
Hauptverfasser: Cuscó, Anna, Catozzi, Carlotta, Viñes, Joaquim, Sanchez, Armand, Francino, Olga
Format: Artigo
Sprache:Inglês
Veröffentlicht: F1000 Research Limited 2019
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6372929/
https://ncbi.nlm.nih.gov/pubmed/30815250
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.12688/f1000research.16817.2
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