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pblat: a multithread blat algorithm speeding up aligning sequences to genomes

BACKGROUND: The blat is a widely used sequence alignment tool. It is especially useful for aligning long sequences and gapped mapping, which cannot be performed properly by other fast sequence mappers designed for short reads. However, the blat tool is single threaded and when used to map whole geno...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Wang, Meng, Kong, Lei
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2019
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6334396/
https://ncbi.nlm.nih.gov/pubmed/30646844
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-2597-8
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